SubtiBank SubtiBank
yjhB [2019-06-21 09:50:57]
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yjhB [2019-06-21 09:50:57]

[SW|Nudix hydrolase], similar to mutator [protein|6085BDAD40F719555EA4EEA7BBAD74103BD03D0F|MutT] protein
locus
BSU12190
pI
5.08
mw
19.23 kDa
protein length
208 aa Sequence Blast
gene length
627 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.6|DNA repair/ recombination/ based on similarity]

    • Gene

    Coordinates
    1,290,018 → 1,290,644

    The protein

    Protein family

  • [SW|Nudix hydrolase]

    • Structure

  • [PDB|3Q1P] (from ''B. cereus'', 42% identity, 77% similarity) [Pubmed|21531795]

    • Expression and Regulation

    Operons

    genes
    [gene|772A05040C46912B9FDEE4F4F817CE0C92EC7C1A|yjhA]-[gene|FF6A150806407E7D10C090FA2CDB521DDC7811F9|yjhB]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A375 (yjhB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/375 NBRP B. subtilis, Japan]
  • BKE12190 (Δ[gene|FF6A150806407E7D10C090FA2CDB521DDC7811F9|yjhB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE12190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTCATCCTTTCAAGTCAA, downstream forward: _UP4_TAAAAAAGAAAGAGCCTGTG
  • BKK12190 (Δ[gene|FF6A150806407E7D10C090FA2CDB521DDC7811F9|yjhB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK12190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTCATCCTTTCAAGTCAA, downstream forward: _UP4_TAAAAAAGAAAGAGCCTGTG

    • References

  • 27766092